Facial reconstruction

Search LJMU Research Online

Browse Repository | Browse E-Theses

proBed: extension of the BED format for mapping peptides identified by mass spectrometry to a genome

Ghali, F, Tobias, T, Andrew R, J and Juan Antonio, V (2017) proBed: extension of the BED format for mapping peptides identified by mass spectrometry to a genome. PSI Proteomics Informatics Workgroup.

[img]
Preview
Text
R1_proBed_version1.pdf - Accepted Version

Download (1MB) | Preview

Abstract

The Human Proteome Organisation (HUPO) Proteomics Standards Initiative (PSI) defines community standards for data representation in proteomics to facilitate data comparison, exchange and verification. The Proteomics Informatics Working Group is developing standards for describing the results of identification and quantification processes for proteins, peptides, small molecules and protein modifications from mass spectrometry. This document defines a tab delimited text file format to report “proteogenomics” results i.e. the identification and mapping of peptide/protein sequences back against a genome, to assist in annotation efforts.

Item Type: Article
Subjects: Q Science > QA Mathematics > QA75 Electronic computers. Computer science
R Medicine > RM Therapeutics. Pharmacology
Divisions: Computer Science & Mathematics
Publisher: Human Proteome Organisation
Date Deposited: 28 May 2020 10:55
Last Modified: 28 May 2020 11:00
URI: http://researchonline.ljmu.ac.uk/id/eprint/12906

Actions (login required)

View Item View Item